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Publication
PropertyValue
Working Groups RG Zimmermann
SubprojectNone
Open AccessOpen Access Yes
Publication TypeJournal Article
Peer ReviewedYes
PMIDPubMed ID 39317836
DOIDOI 10.1038/s44161-024-00544-7
Publication Year2024
TitleEvolution of translational control and the emergence of genes and open reading frames in human and non-human primate hearts
JournalNature Cardiovascular Research
ISSN2731-0590
URL http://dx.doi.org/10.1038/s44161-024-00544-7
Journal AbbreviationNat Cardiovasc Res
AuthorsRuiz-Orera J, Miller DC, Greiner J, Genehr C, Grammatikaki A, Blachut S, Mbebi J, Patone G, Myronova A, Adami E, Dewani N, Liang N, Hummel O, Muecke MB, Hildebrandt TB, Fritsch G, Schrade L, Zimmermann WH, Kondova I, Diecke S, van Heesch S, Hübner N
First AuthorRuiz-Orera J
Last AuthorHübner N

 External Resources

 12251  Addgene identifier (12251, reused)

 12253  Addgene identifier (12253, reused)

 12259  Addgene identifier (12259, reused)

 86708  Addgene identifier (86708, reused)

 nature.c...-7.pdf  Article fulltext

 E-MTAB-6798  EMBL ArrayExpress identifier (E-MTAB-6798, reused)

 E-MTAB-6811  EMBL ArrayExpress identifier (E-MTAB-6811, reused)

 E-MTAB-6813  EMBL ArrayExpress identifier (E-MTAB-6813, reused)

 E-MTAB-6814  EMBL ArrayExpress identifier (E-MTAB-6814, reused)

 E-MTAB-7247  EMBL ArrayExpress identifier (E-MTAB-7247, reused)

 PRJEB29208  EMBL-EBI ENA identifier (PRJEB29208, reused)

 PRJEB65856  EMBL-EBI ENA identifier (PRJEB65856)

 EGAD00001003391  EGA identifier (EGAD00001003391, reused)

 EGAD00001004394  EGA identifier (EGAD00001004394, reused)

 gro-2/145804  GRO.publications identifier

 SRP186138  NCBI sra identifier (SRP186138)

 9592  NCBI taxonomy (Gorilla)

 9606  NCBI taxonomy (human, Homo sapiens)

 9544  NCBI taxonomy (Rhesus monkey, Macaca mulatta)

 0000-0002-8317-0034  ORCID identifier (Jorge Ruiz-Orera)

 0000-0002-7242-0341  ORCID identifier (Giannino Patone)

 0000-0002-2287-6674  ORCID identifier (Nikita Dewani)

 0009-0005-7249-1640  ORCID identifier (Lisa Schrade)

 0000-0003-1190-4040  ORCID identifier (Wolfram Hubertus Zimmermann)

 0000-0001-9593-1980  ORCID identifier (Sebastiaan van Heesch)

 0000-0002-1218-6223  ORCID identifier (Norbert Hübner)

 544  Published Data Registry entry (CRC 1002)

 1/513  Research Data Archive (supplemental material)

 02ahxbh87  ROR identifier (02ahxbh87, Biomedical Primate Research Centre)

 01s1h3j07  ROR identifier (01s1h3j07, Fraunhofer Institute for Translational Medicine and Pharmacology)

 031t5w623  ROR identifier (031t5w623, German Centre for Cardiovascular Research)

 043j0f473  ROR identifier (043j0f473, German Center for Neurodegenerative Diseases)

 038t36y30  ROR identifier (038t36y30, Heidelberg University)

 05nywn832  ROR identifier (05nywn832, Leibniz Institute for Zoo and Wildlife Research)

 04p5ggc03  ROR identifier (04p5ggc03, Max Delbrück Center for Molecular Medicine)

 05xy1nn52  ROR identifier (05xy1nn52, Multiscale Bioimaging)

 01n92vv28  ROR identifier (01n92vv28, Oncode Institute)

 02aj7yc53  ROR identifier (02aj7yc53, Princess Máxima Center)

 021ft0n22  ROR identifier (021ft0n22, University Medical Center Göttingen)

 SCR_017344  SciCrunch identifier (RRID:SCR_017344, Cell Ranger)

 SCR_015687  SciCrunch identifier (RRID:SCR_015687, DESeq2)

 SCR_002344  SciCrunch identifier (RRID:SCR_002344, Ensembl)

 SCR_006809  SciCrunch identifier (RRID:SCR_006809, g:Profiler)

 SCR_022798  SciCrunch identifier (RRID:SCR_022798, harmonypy)

 SCR_005829  SciCrunch identifier (RRID:SCR_005829, InterProScan)

 SCR_004870  SciCrunch identifier (RRID:SCR_004870, NCBI BLAST)

 SCR_018139  SciCrunch identifier (RRID:SCR_018139, scanpy)

 SCR_015899  SciCrunch identifier (RRID:SCR_015899, STAR)

 SCR_016323  SciCrunch identifier (RRID:SCR_016323, StringTie)

 SCR_005780  SciCrunch identifier (RRID:SCR_005780, UCSC Genome Browser)

 static-c...SM.pdf  Supplemental material

 github.c...l_2024  Supplemental material (code)

 github.com/facebookresearch/esm  Supplemental material (code, reused)

 github.com/lcalviell/ORFquant  Supplemental material (code, reused)

 goeseek.gwdguser.de/studies/202  Supplemental material (goeseek study)

 static-c...SM.pdf  Supplemental material (reporting summary)

 static-c...M.xlsx  Supplemental material (table)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 static-c...M.xlsx  Supplemental material (source data)

 mbexc.de...earts/  Website entry (mbexc.de)

Linked Antibodies

PIDAGTypeAntigen symbolAntibody Registry IDName
primary-0102primaryACTN2AB_476766Anti-α-Actinin (Sarcomeric) antibody
primary-0622primaryNKX2-5 AB_355269NKX2.5 Antibody
primary-1021primaryPOU5F1 AB_2167703Oct-3/4 Antibody (H-134)
primary-1159primaryMYL2AB_2147453Myosin Light Chain 2/MLC-2V Polyclonal antibody
primary-1716primarySSEA4SSEA4 (MC813) Mouse mAb
primary-1717primaryAB_2119059TRA-1-60(S) (TRA-1-60(S)) Mouse mAb
primary-1718primaryAnti-Cardiac Troponin T antibody [1F11]
primary-1720primaryTNNT2AB_2751735Cardiac Troponin T Antibody, anti-human/mouse/rat, REAfinity™
primary-1721primaryMYL2AB_2652947MLC2v Antibody, anti-human/mouse/rat, REAfinity™
primary-1722primaryAB_2733688REA Control Antibody, human IgG1, REAfinity™
primary-1723primaryAB_2733446REA Control Antibody, human IgG1, REAfinity™
secondary-0021secondaryAB_2534102Donkey anti-Goat IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488
secondary-0392secondaryAB_2535792Donkey anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488
secondary-0394secondaryAB_141607Donkey anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488
secondary-1719secondaryAB_2535711Goat anti-Mouse IgM (Heavy chain) Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 488