External Resources
cell.com...0400-3https://www.cell.com/molecular-cell/pdfExtended/S1097-2765(24)00400-3
Article fulltext
gro-2/144112http://resolver.sub.uni-goettingen.de/purl?gro-2/144112
GRO.publications identifier
GSE218269https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218269
NCBI GEO Dataset (GSE218269)
GSE133156https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133156
NCBI GEO Dataset (GSE133156, reused)
9606https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606
NCBI taxonomy (human, Homo sapiens)
7227https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=7227
NCBI taxonomy (fruit fly, Drosophila melanogaster)
1247190https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1247190
NCBI taxonomy (yeast, Saccharomyces cerevisiae BY4741)
0000-0003-4087-3730https://orcid.org/0000-0003-4087-3730
ORCID identifier (Taras Velychko)
0009-0003-8951-1463https://orcid.org/0009-0003-8951-1463
ORCID identifier (Eusra Mohammad)
0000-0002-3553-0488https://orcid.org/0000-0002-3553-0488
ORCID identifier (Ivan Ferrer-Vicens)
0000-0002-0203-2167https://orcid.org/0000-0002-0203-2167
ORCID identifier (Iwan Parfentev)
0000-0002-6328-048Xhttps://orcid.org/0000-0002-6328-048X
ORCID identifier (Marcel Werner)
0000-0003-0889-9949https://orcid.org/0000-0003-0889-9949
ORCID identifier (Cecilia Studniarek)
0000-0003-2987-2622https://orcid.org/0000-0003-2987-2622
ORCID identifier (Björn Schwalb)
0000-0003-1837-5233https://orcid.org/0000-0003-1837-5233
ORCID identifier (Henning Urlaub)
0000-0001-5454-7755https://orcid.org/0000-0001-5454-7755
ORCID identifier (Patrick Cramer)
PXD037842http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD037842
Pride proteome dataset (PXD037842)
1/459https://mbexc.uni-goettingen.de/archive/1/459
Research Data Archive MBExC (supplemental material)
03av75f26https://ror.org/03av75f26
ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
05xy1nn52https://ror.org/05xy1nn52
ROR identifier (05xy1nn52, Multiscale Bioimaging)
021ft0n22https://ror.org/021ft0n22
ROR identifier (021ft0n22, University Medical Center Göttingen)
0524sp257https://ror.org/0524sp257
ROR identifier (0524sp257, University of Bristol)
052gg0110https://ror.org/052gg0110
ROR identifier (052gg0110, University of Oxford)
CVCL_0045https://scicrunch.org/resolver/CVCL_0045
SciCrunch identifier (RRID:CVCL_0045, HEK293)
CVCL_Z232https://scicrunch.org/resolver/CVCL_Z232
SciCrunch identifier (RRID:CVCL_Z232, Schneider 2)
SCR_006646https://scicrunch.org/resolver/SCR_006646
SciCrunch identifier (RRID:SCR_006646, BEDTools)
SCR_005476https://scicrunch.org/resolver/SCR_005476
SciCrunch identifier (RRID:SCR_005476, Bowtie)
SCR_011841https://scicrunch.org/resolver/SCR_011841
SciCrunch identifier (RRID:SCR_011841, cutadapt)
SCR_015687https://scicrunch.org/resolver/SCR_015687
SciCrunch identifier (RRID:SCR_015687, DESeq2)
SCR_005514https://scicrunch.org/resolver/SCR_005514
SciCrunch identifier (RRID:SCR_005514, HTSeq)
SCR_014485https://scicrunch.org/resolver/SCR_014485
SciCrunch identifier (RRID:SCR_014485, MaxQuant)
SCR_015753https://scicrunch.org/resolver/SCR_015753
SciCrunch identifier (RRID:SCR_015753, Perseus)
SCR_017036https://scicrunch.org/resolver/SCR_017036
SciCrunch identifier (RRID:SCR_017036, Salmon)
SCR_002105https://scicrunch.org/resolver/SCR_002105
SciCrunch identifier (RRID:SCR_002105, Samtools)
SCR_004463https://scicrunch.org/resolver/SCR_004463
SciCrunch identifier (RRID:SCR_004463, STAR)
cell.com...c1.pdfhttps://www.cell.com/cms/10.1016/j.molcel.2024.05.007/attachment/8d836ebd-956f-4689-a1fa-7cb8af8b8d2f/mmc1.pdf
Supplemental material
github.com/sklasfeld/DANPOS3https://github.com/sklasfeld/DANPOS3
Supplemental material (code, reused)
goeseek.gwdguser.de/studies/176https://goeseek.gwdguser.de/studies/176
Supplemental material (goeseek study)
cell.com...2.xlsxhttps://www.cell.com/cms/10.1016/j.molcel.2024.05.007/attachment/8606e0b0-1aec-4d6d-b177-54a2a638e184/mmc2.xlsx
Supplemental material (table)
cell.com...3.xlsxhttps://www.cell.com/cms/10.1016/j.molcel.2024.05.007/attachment/c0ba06c3-0a44-4800-aa95-6446fa2fcb12/mmc3.xlsx
Supplemental material (table)
cell.com...4.xlsxhttps://www.cell.com/cms/10.1016/j.molcel.2024.05.007/attachment/a915330c-edcb-44f8-b4ed-27ad5282c94c/mmc4.xlsx
Supplemental material (table)
cell.com...5.xlsxhttps://www.cell.com/cms/10.1016/j.molcel.2024.05.007/attachment/3e838f7c-cffc-4348-b204-ba2e08b6bfc9/mmc5.xlsx
Supplemental material (table)
mbexc.de...lease/https://mbexc.de/cdk7-kinase-activity-promotes-rna-polymerase-ii-promoter-escape-by-facilitating-initiation-factor-release/
Website entry (mbexc.de)