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Publication

Property	Value
Working Groups	RG Schuh
Subproject	None
Open Access	Yes
Publication Type	Journal Article
Peer Reviewed	Yes
DOI	10.1016/j.cell.2024.01.031
Publication Year	2024
Title	Mouse oocytes sequester aggregated proteins in degradative super-organelles
Journal	Cell
ISSN	0092-8674
eISSN	1097-4172
URL	http://dx.doi.org/10.1016/j.cell.2024.01.031
Journal Abbreviation	Cell
Authors	Zaffagnini G, Cheng S, Salzer MC, Pernaute B, Duran JM, Irimia M, Schuh M, Böke E
First Author	Zaffagnini G
Last Author	Böke E

External Resources

22852https://www.addgene.org/22852 Addgene identifier (22852, reused)

78289https://www.addgene.org/78289 Addgene identifier (78289, reused)

cell.com...0068-0https://www.cell.com/action/showPdf?pii=S0092-8674%2824%2900068-0 Article fulltext

gro-2/142165http://resolver.sub.uni-goettingen.de/purl?gro-2/142165 GRO.publications identifier

9606https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606 NCBI taxonomy (human, Homo sapiens)

10090https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10090 NCBI taxonomy (mouse, Mus musculus)

0000-0003-0025-8952https://orcid.org/0000-0003-0025-8952 ORCID identifier (Melina Schuh)

PXD042768http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD042768 Pride proteome dataset (PXD042768)

PXD042769http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD042769 Pride proteome dataset (PXD042769)

PXD047716http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD047716 Pride proteome dataset (PXD047716)

1/405https://mbexc.uni-goettingen.de/archive/1/405 Research Data Archive (supplemental material)

03kpps236https://ror.org/03kpps236 ROR identifier (03kpps236, Barcelona Institute for Science and Technology)

03av75f26https://ror.org/03av75f26 ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)

05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)

04n0g0b29https://ror.org/04n0g0b29 ROR identifier (04n0g0b29, Pompeu Fabra University)

AB_313212https://scicrunch.org/resolver/AB_313212 SciCrunch identifier (RRID:AB_313212)

AB_397829https://scicrunch.org/resolver/AB_397829 SciCrunch identifier (RRID:AB_397829)

AB_399295https://scicrunch.org/resolver/AB_399295 SciCrunch identifier (RRID:AB_399295)

AB_449893https://scicrunch.org/resolver/AB_449893 SciCrunch identifier (RRID:AB_449893)

AB_477157https://scicrunch.org/resolver/AB_477157 SciCrunch identifier (RRID:AB_477157)

AB_477593https://scicrunch.org/resolver/AB_477593 SciCrunch identifier (RRID:AB_477593)

AB_614942https://scicrunch.org/resolver/AB_614942 SciCrunch identifier (RRID:AB_614942)

AB_615042https://scicrunch.org/resolver/AB_615042 SciCrunch identifier (RRID:AB_615042)

AB_775978https://scicrunch.org/resolver/AB_775978 SciCrunch identifier (RRID:AB_775978)

AB_791015https://scicrunch.org/resolver/AB_791015 SciCrunch identifier (RRID:AB_791015)

AB_1925011https://scicrunch.org/resolver/AB_1925011 SciCrunch identifier (RRID:AB_1925011)

AB_2069006https://scicrunch.org/resolver/AB_2069006 SciCrunch identifier (RRID:AB_2069006)

AB_2083165https://scicrunch.org/resolver/AB_2083165 SciCrunch identifier (RRID:AB_2083165)

AB_2183747https://scicrunch.org/resolver/AB_2183747 SciCrunch identifier (RRID:AB_2183747)

AB_2210370https://scicrunch.org/resolver/AB_2210370 SciCrunch identifier (RRID:AB_2210370)

AB_2218783https://scicrunch.org/resolver/AB_2218783 SciCrunch identifier (RRID:AB_2218783)

AB_2246120https://scicrunch.org/resolver/AB_2246120 SciCrunch identifier (RRID:AB_2246120)

AB_2268907https://scicrunch.org/resolver/AB_2268907 SciCrunch identifier (RRID:AB_2268907)

AB_2534125https://scicrunch.org/resolver/AB_2534125 SciCrunch identifier (RRID:AB_2534125)

AB_2535805https://scicrunch.org/resolver/AB_2535805 SciCrunch identifier (RRID:AB_2535805)

AB_2535813https://scicrunch.org/resolver/AB_2535813 SciCrunch identifier (RRID:AB_2535813)

AB_2535849https://scicrunch.org/resolver/AB_2535849 SciCrunch identifier (RRID:AB_2535849)

AB_2556602https://scicrunch.org/resolver/AB_2556602 SciCrunch identifier (RRID:AB_2556602)

AB_2556775https://scicrunch.org/resolver/AB_2556775 SciCrunch identifier (RRID:AB_2556775)

AB_2807529https://scicrunch.org/resolver/AB_2807529 SciCrunch identifier (RRID:AB_2807529)

AB_10678258https://scicrunch.org/resolver/AB_10678258 SciCrunch identifier (RRID:AB_10678258)

AB_10681625https://scicrunch.org/resolver/AB_10681625 SciCrunch identifier (RRID:AB_10681625)

AB_10899268https://scicrunch.org/resolver/AB_10899268 SciCrunch identifier (RRID:AB_10899268)

AB_11034537https://scicrunch.org/resolver/AB_11034537 SciCrunch identifier (RRID:AB_11034537)

CVCL_0030https://scicrunch.org/resolver/CVCL_0030 SciCrunch identifier (RRID:CVCL_0030, HeLa)

SCR_023662https://scicrunch.org/resolver/SCR_023662 SciCrunch identifier (RRID:SCR_023662, AlphaFold Protein Structure Database)

SCR_002285https://scicrunch.org/resolver/SCR_002285 SciCrunch identifier (RRID:SCR_002285, Fiji)

SCR_002798https://scicrunch.org/resolver/SCR_002798 SciCrunch identifier (RRID:SCR_002798, GraphPad Prism)

SCR_003297https://scicrunch.org/resolver/SCR_003297 SciCrunch identifier (RRID:SCR_003297, IMOD)

SCR_013673https://scicrunch.org/resolver/SCR_013673 SciCrunch identifier (RRID:SCR_013673, Leica Application Suite X)

SCR_014322https://scicrunch.org/resolver/SCR_014322 SciCrunch identifier (RRID:SCR_014322, Mascot)

SCR_014477https://scicrunch.org/resolver/SCR_014477 SciCrunch identifier (RRID:SCR_014477, Proteome Discoverer)

SCR_017293https://scicrunch.org/resolver/SCR_017293 SciCrunch identifier (RRID:SCR_017293, SerialEM)

SCR_013672https://scicrunch.org/resolver/SCR_013672 SciCrunch identifier (RRID:SCR_013672, ZEN Digital Imaging for Light Microscopy)

cell.com...c4.pdfhttps://www.cell.com/cms/10.1016/j.cell.2024.01.031/attachment/ba4ff73e-284e-4e9a-8ff1-671dc8dce359/mmc4.pdf Supplemental material

goeseek.gwdguser.de/studies/147https://goeseek.gwdguser.de/studies/147 Supplemental material (goeseek study)

cell.com...1.xlsxhttps://www.cell.com/cms/10.1016/j.cell.2024.01.031/attachment/da7a90fd-3ac7-4c7e-8000-feb8e284cf9f/mmc1.xlsx Supplemental material (table)

cell.com...2.xlsxhttps://www.cell.com/cms/10.1016/j.cell.2024.01.031/attachment/d1bf839a-d84f-4274-bcca-a4269dce3ab0/mmc2.xlsx Supplemental material (table)

cell.com...3.xlsxhttps://www.cell.com/cms/10.1016/j.cell.2024.01.031/attachment/7cf040d5-7df7-471c-a38b-f70add084acf/mmc3.xlsx Supplemental material (table)

cell.com...c9.mp4https://www.cell.com/cms/10.1016/j.cell.2024.01.031/attachment/39091375-4bc8-4ba6-bd49-965ad79d14c0/mmc9.mp4 Supplemental material (video)

mbexc.de...elles/https://mbexc.de/mouse-oocytes-sequester-aggregated-proteins-in-degradative-super-organelles/ Website entry (mbexc.de)

10.5281/zenodo.10446149https://doi.org/10.5281/zenodo.10446149 Zenodo identifier (10.5281/zenodo.10446149)

Linked Antibodies

PID	Type	Antigen symbol	Antibody Registry ID	Name
primary-0160	primary	TUBA4A	AB_477593	Anti-α-Tubulin antibody
primary-0257	primary	CLTC	AB_2083165	Anti-Clathrin heavy chain antibody
primary-0382	primary	TUBB	AB_2210370	Anti-beta Tubulin antibody - Loading Control
primary-0414	primary	TARDBP	AB_615042	TDP-43 Polyclonal antibody
primary-0526	primary	PCNT	AB_399295	Purified Mouse Anti-Mouse Pericentrin antibody
primary-0780	primary	PDCD6IP	AB_10899268	Anti-ALIX antibody
primary-0861	primary	LAMP1	AB_775978	Anti-LAMP1 antibody - Lysosome Marker
primary-0872	primary	LAMP1	AB_449893	Anti-LAMP1 antibody
primary-0941	primary	CANX	AB_2069006	Anti-Calnexin antibody - ER Marker
primary-1204	primary	ZAR1	AB_2218783	ZAR1(C-14)
primary-1370	primary	EEA1	AB_397829	Purified Mouse Anti-EEA1
primary-1371	primary		AB_10681625	Anti-Ubiquitin Mouse mAb (FK2)
primary-1372	primary		AB_10678258	Anti-Citrate synthetase antibody
primary-1373	primary		AB_2246120	Anti-STELLAR antibody
primary-1374	primary	G3BP2	AB_1925011	Anti-G3BP2 antibody
primary-1375	primary	GM130	AB_2807529	GM130 Polyclonal Antibody
primary-1376	primary	HGS		Anti-HGS antibody - C-terminal
primary-1377	primary	LAMP1	AB_477157	Anti-LAMP1 antibody produced in rabbit
primary-1378	primary	MAP1LC3B	AB_791015	LC3B Antibody - BSA Free
primary-1379	primary	RAP55B		Anti-RAP55B antibody
primary-1380	primary	MYH10		Anti-non-muscle Myosin IIB/MYH10 antibody [EPR22564-23]
primary-1381	primary	MYO5B	AB_11034537	Myosin VB Antibody
primary-1382	primary		AB_2268907	Anti-Proteasome 20S alpha + beta antibody
primary-1383	primary	RUFY1	AB_2183747	RUFY1 Polyclonal antibody
primary-1384	primary		AB_313212	Biotin anti-mouse CD117 (c-Kit) Antibody
secondary-0019	secondary		AB_2535849	Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 555
secondary-0219	secondary		AB_2535805	Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 647
secondary-1385	secondary		AB_614942	Goat anti-Mouse IgG (H+L) Secondary Antibody, DyLight™ 680
secondary-1386	secondary		AB_2556775	Goat anti-Rabbit IgG (H+L) Secondary Antibody, DyLight™ 800 4X PEG, Invitrogen™
secondary-1387	secondary		AB_2535813	Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 647
secondary-1388	secondary		AB_2534125	Goat anti-Rat IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 546
secondary-1389	secondary		AB_2556602	Goat anti-Rat IgG (H+L) Cross-Adsorbed Secondary Antibody, DyLight™ 680