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Property	Value
Working Groups	RG Fischer
Subproject	RA1.2
Open Access	Yes
Publication Type	Journal Article
Peer Reviewed	Yes
PMID	36598943
DOI	10.1073/pnas.2122467120
Publication Year	2023
Title	Multimodal epigenetic changes and altered NEUROD1 chromatin binding in the mouse hippocampus underlie FOXG1 syndrome
Journal	Proceedings of the National Academy of Sciences of the United States of America
ISSN	0027-8424
eISSN	1091-6490
URL	http://dx.doi.org/10.1073/pnas.2122467120
Issue	2
Volume	120
Journal Abbreviation	Proc Natl Acad Sci U S A
Authors	Akol I, Izzo A, Gather F, Strack S, Heidrich S, Ó hAilín D, Villarreal A, Hacker C, Rauleac T, Bella C, Fischer A, Manke T, Vogel T
First Author	Akol I
Last Author	Vogel T

 External Resources

 pnas.org...d=truehttps://www.pnas.org/doi/pdf/10.1073/pnas.2122467120?download=true Article fulltext

 2/120938http://resolver.sub.uni-goettingen.de/purl?2/120938 GRO.publications identifier

 GSE189119https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE189119 NCBI GEO Dataset (GSE189119)

 GSE106802https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106802 NCBI GEO Dataset (GSE106802, reused)

 0000-0003-0842-6201https://orcid.org/0000-0003-0842-6201 ORCID identifier (Ipek Akol)

 0000-0001-5826-7945https://orcid.org/0000-0001-5826-7945 ORCID identifier (Annalisa Izzo)

 0000-0001-9715-1582https://orcid.org/0000-0001-9715-1582 ORCID identifier (Fabian Gather)

 0000-0002-4783-4833https://orcid.org/0000-0002-4783-4833 ORCID identifier (Darren Ó hAilín)

 0000-0001-8624-8119https://orcid.org/0000-0001-8624-8119 ORCID identifier (Alejandro Villarreal)

 0000-0002-6545-0104https://orcid.org/0000-0002-6545-0104 ORCID identifier (Christine Hacker)

 0000-0002-4059-2499https://orcid.org/0000-0002-4059-2499 ORCID identifier (Tudor Rauleac)

 0000-0002-1057-429Xhttps://orcid.org/0000-0002-1057-429X ORCID identifier (Chiara Bella)

 0000-0001-8546-1161https://orcid.org/0000-0001-8546-1161 ORCID identifier (André Fischer)

 0000-0002-0602-9133https://orcid.org/0000-0002-0602-9133 ORCID identifier (Tanja Vogel)

 410https://prod.mbexc.uni-goettingen.de/literature/publications/410 Published Data Registry entry (MBExC, preprint)

 1/117https://mbexc.uni-goettingen.de/archive/1/117 Research Data Archive (supplemental material)

 0245cg223https://ror.org/0245cg223 University of Freiburg

 SCR_017001https://scicrunch.org/resolver/SCR_017001 SciCrunch identifier (RRID:SCR_017001, Allen Brain Atlas)

 SCR_003032https://scicrunch.org/resolver/SCR_003032 SciCrunch identifier (RRID:SCR_003032, Cytoscape)

 SCR_002798https://scicrunch.org/resolver/SCR_002798 SciCrunch identifier (RRID:SCR_002798, GraphPad Prism)

 pnas.org...pp.pdfhttps://www.pnas.org/doi/suppl/10.1073/pnas.2122467120/suppl_file/pnas.2122467120.sapp.pdf Supplemental material

 github.c...ctionshttps://github.com/Vogel-lab/Integrative-multiomics-analyses-of-FOXG1-functions Supplemental material

 mbexc.de...ampus/https://mbexc.de/integrative-multi-omics-analyses-reveal-multi-modal-foxg1-functions-acting-on-epigenetic-processes-and-in-concert-with-neurod1-to-regulate-synaptogenesis-in-the-mouse-hippocampus/ Website entry (mbexc.de)

Linked Antibodies

PID	AG	Type	Antigen symbol	Antibody Registry ID	Name
primary-0055		primary	H3	AB_302613	Anti-Histone H3 antibody
primary-0060		primary	GAPDH	AB_2107448	Anti-GAPDH antibody [6C5]
primary-1297		primary	FOXG1	AB_2793554	FOXG1 antibody (pAb)
primary-1299		primary	NeuroD1	AB_10861489	NeuroD1 antibody [EPR4008]
primary-1300		primary	H3K27ac	AB_2561016	H3K27ac-mouse
primary-1301		primary		AB_2722554	Rabbit negative Ctrl IgG
primary-1302		primary	HDAC2	AB_2756828	HDAC2 (D6S5P)
primary-1303		primary	SirT1	AB_10999470	SirT1 (1F3)
primary-1304		primary	HDAC1	AB_2118083	Mouse Anti-HDAC1 Monoclonal Antibody, Unconjugated, Clone 10E2
primary-1305		primary		AB_2722553	mouse IgG negative control antibody
primary-1306		primary		AB_1549585	HA-Tag (C29F4) Rabbit mAb