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Working Groups RG Fischer
Open AccessOpen Access Yes
Publication TypePreprint
Peer ReviewedNo
DOIDOI 10.1101/2021.10.25.465562
Publication Year2021
TitleIntegrative multi-omics analyses reveal multi-modal FOXG1 functions acting on epigenetic processes and in concert with NEUROD1 to regulate synaptogenesis in the mouse hippocampus
ISSNno ISSN (NLM ID:101680187)
Journal AbbreviationbioRxiv
ExtraFinal article published in Proceedings of the National Academy of Sciences of the United States of America here: doi:10.1073/pnas.2122467120. The original URL to the code resource on Github is not working anymore. It has been updated in the "External Resources" section to the new location.
AuthorsAkol I, Heidrich S, ÓhAilín D, Hacker C, Villarreal A, Rauleac T, Bella C, Fischer A, Manke T, Vogel T
First AuthorAkol I
Last AuthorVogel T

 External Resources

 biorxiv....ll.pdf  Article fulltext

 10090  NCBI taxonomy (mouse, Mus musculus)

 0000-0003-0842-6201  ORCID identifier (Ipek Akol)

 0000-0001-8546-1161  ORCID identifier (André Fischer)

 0000-0002-0602-9133  ORCID identifier (Tanja Vogel)

 650  Published Data Registry entry (MBExC)

 1/309  Research Data Archive (supplemental material)

 043j0f473  ROR identifier (043j0f473, German Center for Neurodegenerative Diseases)

 05xy1nn52  ROR identifier (05xy1nn52, Multiscale Bioimaging)

 021ft0n22  ROR identifier (021ft0n22, University Medical Center Göttingen)

 SCR_006442  SciCrunch identifier (RRID:SCR_006442, Bioconductor)

 SCR_018361  SciCrunch identifier (RRID:SCR_018361, Biorender)

 SCR_021322  SciCrunch identifier (RRID:SCR_021322, ChIPseeker)

 SCR_016884  SciCrunch identifier (RRID:SCR_016884, clusterProfiler)

 SCR_003032  SciCrunch identifier (RRID:SCR_003032, Cytoscape)

 SCR_016366  SciCrunch identifier (RRID:SCR_016366, Deeptools)

 SCR_015687  SciCrunch identifier (RRID:SCR_015687, DESeq2)

 SCR_012918  SciCrunch identifier (RRID:SCR_012918, DiffBind)

 SCR_018931  SciCrunch identifier (RRID:SCR_018931, EnhancedVolcano)

 SCR_012919  SciCrunch identifier (RRID:SCR_012919, featureCounts)

 SCR_006281  SciCrunch identifier (RRID:SCR_006281, Galaxy)

 SCR_018419  SciCrunch identifier (RRID:SCR_018419, GeneOverlap)

 SCR_014601  SciCrunch identifier (RRID:SCR_014601, ggplot2)

 SCR_001146  SciCrunch identifier (RRID:SCR_001146, GimmeMotifs)

 SCR_002798  SciCrunch identifier (RRID:SCR_002798, GraphPad Prism)

 SCR_014246  SciCrunch identifier (RRID:SCR_014246, ImageQuant)

 SCR_013291  SciCrunch identifier (RRID:SCR_013291, MACS)

 SCR_008394  SciCrunch identifier (RRID:SCR_008394, Python)

 SCR_001905  SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)

 github.c...ctions  Supplemental material (code)