| Property |
Value |
| Working Groups |
RG Pape |
| Subproject |
None |
| Open Access |
Yes |
| Publication Type |
Preprint |
| Peer Reviewed |
No |
| DOI |
10.1101/2024.08.02.606323 |
| Publication Year |
2024 |
| Title |
Highly adaptable deep-learning platform for automated detection and analysis of vesicle exocytosis |
| Journal |
bioRxiv |
| eISSN |
2692-8205 |
| URL |
https://doi.org/10.1101/2024.08.02.606323 |
| Journal Abbreviation |
bioRxiv |
| Extra |
Final article published in Nature Communications here: doi:10.1038/s41467-025-61579-3 |
| Authors |
Chouaib AA, Chang H, Khamis OM, Echeverry S, Demeersseman L, Elizarova S, Daniel JA, Valitutti S, Barg S, Pape C, Shaib AH, Becherer U |
| First Author |
Chouaib AA |
| Last Author |
Becherer U |
External Resources
biorxiv....ll.pdfhttps://www.biorxiv.org/content/10.1101/2024.08.02.606323v1.full.pdf Article fulltext
2/151194http://resolver.sub.uni-goettingen.de/purl?2/151194 GRO.publications identifier
9606https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606 NCBI taxonomy (human, Homo sapiens)
10090https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10090 NCBI taxonomy (mouse, Mus musculus)
0009-0009-6973-1630https://orcid.org/0009-0009-6973-1630 ORCID identifier (Abed Alrahman Chouaib)
0000-0002-7691-4090https://orcid.org/0000-0002-7691-4090 ORCID identifier (Hsin-Fang Chang)
0009-0007-8175-9965https://orcid.org/0009-0007-8175-9965 ORCID identifier (Omnia M. Khamis)
0000-0002-8591-2513https://orcid.org/0000-0002-8591-2513 ORCID identifier (Nadia Alawar)
0000-0001-7145-9802https://orcid.org/0000-0001-7145-9802 ORCID identifier (Santiago Echeverry)
0000-0001-8404-4761https://orcid.org/0000-0001-8404-4761 ORCID identifier (Lucie Demeersseman)
0000-0002-5757-764Xhttps://orcid.org/0000-0002-5757-764X ORCID identifier (Sofia Elizarova)
0000-0002-2781-4544https://orcid.org/0000-0002-2781-4544 ORCID identifier (James A. Daniel)
0000-0002-6432-4421https://orcid.org/0000-0002-6432-4421 ORCID identifier (Salvatore Valitutti)
0000-0003-4661-5724https://orcid.org/0000-0003-4661-5724 ORCID identifier (Sebastian Barg)
0000-0001-6562-7187https://orcid.org/0000-0001-6562-7187 ORCID identifier (Constantin Pape)
0009-0007-2656-3820https://orcid.org/0009-0007-2656-3820 ORCID identifier (Ali H. Shaib)
0000-0001-6005-7517https://orcid.org/0000-0001-6005-7517 ORCID identifier (Ute Becherer)
1247https://prod.mbexc.uni-goettingen.de/literature/publications/1247 Published Data Registry entry (MBExC, final article)
1/633https://mbexc.uni-goettingen.de/archive/1/633 Research Data Archive (supplemental material)
003412r28https://ror.org/003412r28 ROR identifier (003412r28, Centre de Recherche en Cancérologie de Toulouse)
03av75f26https://ror.org/03av75f26 ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
01jdpyv68https://ror.org/01jdpyv68 ROR identifier (01jdpyv68, Saarland University)
021ft0n22https://ror.org/021ft0n22 ROR identifier (021ft0n22, University Medical Center Göttingen)
01y9bpm73https://ror.org/01y9bpm73 ROR identifier (01y9bpm73, University of Göttingen)
048a87296https://ror.org/048a87296 ROR identifier (048a87296, Uppsala University)
CVCL_0352https://scicrunch.org/resolver/CVCL_0352 SciCrunch identifier (RRID:CVCL_0352, INS-1)
SCR_002285https://scicrunch.org/resolver/SCR_002285 SciCrunch identifier (RRID:SCR_002285, Fiji)
SCR_001622https://scicrunch.org/resolver/SCR_001622 SciCrunch identifier (RRID:SCR_001622, MATLAB)
SCR_002368https://scicrunch.org/resolver/SCR_002368 SciCrunch identifier (RRID:SCR_002368, MetaMorph)
SCR_008394https://scicrunch.org/resolver/SCR_008394 SciCrunch identifier (RRID:SCR_008394, Python)
SCR_003210https://scicrunch.org/resolver/SCR_003210 SciCrunch identifier (RRID:SCR_003210, SigmaPlot)
SCR_016345https://scicrunch.org/resolver/SCR_016345 SciCrunch identifier (RRID:SCR_016345, tensorflow)
SCR_022546https://scicrunch.org/resolver/SCR_022546 SciCrunch identifier (RRID:SCR_022546, VisiView)
SCR_021351https://scicrunch.org/resolver/SCR_021351 SciCrunch identifier (RRID:SCR_021351, Zeiss Axio Observer)
biorxiv....d=truehttps://www.biorxiv.org/content/biorxiv/early/2024/08/06/2024.08.02.606323/DC1/embed/media-1.pdf?download=true Supplemental material
github.com/AbedChouaib/IVEAhttps://github.com/AbedChouaib/IVEA Supplemental material (code)
mbexc.de...tosis/https://mbexc.de/highly-adaptable-deep-learning-platform-for-automated-detection-and-analysis-of-vesicle-exocytosis/ Website entry (mbexc.de)