| Property |
Value |
| Working Groups |
RG Fischer |
| Subproject |
None |
| Open Access |
Yes |
| Publication Type |
Journal Article |
| Peer Reviewed |
Yes |
| PMID |
36758798 |
| DOI |
10.1016/j.jcmgh.2023.01.015 |
| Publication Year |
2023 |
| Title |
NFATc1 Is a Central Mediator of EGFR-Induced ARID1A Chromatin Dissociation During Acinar Cell Reprogramming |
| Journal |
Cellular and Molecular Gastroenterology and Hepatology |
| ISSN |
2352-345X |
| eISSN |
2352-345X |
| URL |
http://dx.doi.org/10.1016/j.jcmgh.2023.01.015 |
| Pages |
1219-1246 |
| Issue |
5 |
| Volume |
15 |
| Journal Abbreviation |
Cell Mol Gastroenterol Hepatol |
| Authors |
Zhang Z, Wang X, Hamdan FH, Likhobabina A, Patil S, Aperdannier L, Sen M, Traub J, Neesse A, Fischer A, Papantonis A, Singh SK, Ellenrieder V, Johnsen SA, Hessmann E |
| First Author |
Zhang Z |
| Last Author |
Hessmann E |
External Resources
2/122269https://publications.goettingen-research-online.de/handle/2/122269 GRO.publications identifier
informat...028467https://www.informatics.jax.org/strain/MGI:3028467 MGI identifier (MGI:3028467, C57BL/6J)
GCF_000001405.13https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000001405.13 NCBI Datasets Genome (GCF_000001405.13, human genome)
GCF_000001635.18https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000001635.18 NCBI Datasets Genome (GCF_000001635.18, mouse genome)
GSE166329https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE166329 NCBI GEO identifier (GSE166329)
GSE166330https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE166330 NCBI GEO identifier (GSE166330)
GSE166331https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE166331 NCBI GEO identifier (GSE166331)
GSE166333https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE166333 NCBI GEO identifier (GSE166333)
GSE218822https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218822 NCBI GEO identifier (GSE218822)
GSM982509https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM982509 NCBI GEO identifier (GSM982509)
GSM982511https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM982511 NCBI GEO identifier (GSM982511)
0000-0001-7440-1075https://orcid.org/0000-0001-7440-1075 ORCID identifier (Xin Wang)
0000-0003-2455-2435https://orcid.org/0000-0003-2455-2435 ORCID identifier (Feda H. Hamdan)
0000-0001-8546-1161https://orcid.org/0000-0001-8546-1161 ORCID identifier (André Fischer)
0000-0001-7551-1073https://orcid.org/0000-0001-7551-1073 ORCID identifier (Argyris Papantonis)
0000-0002-5725-4058https://orcid.org/0000-0002-5725-4058 ORCID identifier (Shiv K. Singh)
0000-0001-9981-8571https://orcid.org/0000-0001-9981-8571 ORCID identifier (Volker Ellenrieder)
0000-0003-1198-5805https://orcid.org/0000-0003-1198-5805 ORCID identifier (Steven A. Johnsen)
0000-0002-9462-1291https://orcid.org/0000-0002-9462-1291 ORCID identifier (Elisabeth Hessmann)
043j0f473https://ror.org/043j0f473 ROR identifier (043j0f473, German Center for Neurodegenerative Diseases)
00f2yqf98https://ror.org/00f2yqf98 ROR identifier (00f2yqf98, Hannover Medical School)
02qp3tb03https://ror.org/02qp3tb03 ROR identifier (02qp3tb03, Mayo Clinic)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
021ft0n22https://ror.org/021ft0n22 ROR identifier (021ft0n22, Universitätsmedizin Göttingen)
AB_262011https://scicrunch.org/resolver/AB_262011 SciCrunch identifier (RRID:AB_262011, β-actin)
AB_626668https://scicrunch.org/resolver/AB_626668 SciCrunch identifier (RRID:AB_626668, amylase)
AB_2637010https://scicrunch.org/resolver/AB_2637010 SciCrunch identifier (RRID:AB_2637010, ARID1A)
AB_397581https://scicrunch.org/resolver/AB_397581 SciCrunch identifier (RRID:AB_397581, E-Cadherin)
AB_2174426https://scicrunch.org/resolver/AB_2174426 SciCrunch identifier (RRID:AB_2174426, CD45)
AB_2281021https://scicrunch.org/resolver/AB_2281021 SciCrunch identifier (RRID:AB_2281021, cytokeratin 19)
AB_10920395https://scicrunch.org/resolver/AB_10920395 SciCrunch identifier (RRID:AB_10920395, EGFR)
AB_732110https://scicrunch.org/resolver/AB_732110 SciCrunch identifier (RRID:AB_732110, phosphor-EGFR (Y1068))
AB_2637079https://scicrunch.org/resolver/AB_2637079 SciCrunch identifier (RRID:AB_2637079, H3K27ac)
AB_2885844https://scicrunch.org/resolver/AB_2885844 SciCrunch identifier (RRID:AB_2885844, H3K27ac)
AB_2295297https://scicrunch.org/resolver/AB_2295297 SciCrunch identifier (RRID:AB_2295297, HDAC1)
AB_331563https://scicrunch.org/resolver/AB_331563 SciCrunch identifier (RRID:AB_331563, histone H3)
AB_330924https://scicrunch.org/resolver/AB_330924 SciCrunch identifier (RRID:AB_330924, HRP α-mouse)
AB_2722553https://scicrunch.org/resolver/AB_2722553 SciCrunch identifier (RRID:AB_2722553, mouse IgG)
AB_2722554https://scicrunch.org/resolver/AB_2722554 SciCrunch identifier (RRID:AB_2722554, rabbit IgG)
AB_330744https://scicrunch.org/resolver/AB_330744 SciCrunch identifier (RRID:AB_330744, p44/42 MAPK (ErK1/2))
AB_331772https://scicrunch.org/resolver/AB_331772 SciCrunch identifier (RRID:AB_331772, phospho-p44/42 MAPK (ErK1/2))
AB_2798639https://scicrunch.org/resolver/AB_2798639 SciCrunch identifier (RRID:AB_2798639, MIST1)
AB_448901https://scicrunch.org/resolver/AB_448901 SciCrunch identifier (RRID:AB_448901, NFATc1)
AB_2152503https://scicrunch.org/resolver/AB_2152503 SciCrunch identifier (RRID:AB_2152503, NFATc1)
AB_303308https://scicrunch.org/resolver/AB_303308 SciCrunch identifier (RRID:AB_303308, NFATc1)
Addgene_39311https://scicrunch.org/resolver/Addgene_39311 SciCrunch identifier (RRID:Addgene_39311, pcDNA6-V5/His-ARID1A)
Addgene_48138https://scicrunch.org/resolver/Addgene_48138 SciCrunch identifier (RRID:Addgene_48138, pSpCas9(BB)-2A-GFP (PX458))
Addgene_199743https://scicrunch.org/resolver/Addgene_199743 SciCrunch identifier (RRID:Addgene_199743, pMCV)
CVCL_3481https://scicrunch.org/resolver/CVCL_3481 SciCrunch identifier (RRID:CVCL_3481, 266-6)
CVCL_UY60https://scicrunch.org/resolver/CVCL_UY60 SciCrunch identifier (RRID:CVCL_UY60, KPC)
CVCL_0384https://scicrunch.org/resolver/CVCL_0384 SciCrunch identifier (RRID:CVCL_0384, L3.6pl)
SCR_019715https://scicrunch.org/resolver/SCR_019715 SciCrunch identifier (RRID:SCR_019715, Bioanalyzer 2100)
SCR_016368https://scicrunch.org/resolver/SCR_016368 SciCrunch identifier (RRID:SCR_016368, Bowtie2)
SCR_014551https://scicrunch.org/resolver/SCR_014551 SciCrunch identifier (RRID:SCR_01455, cellSens software)
SCR_001647https://scicrunch.org/resolver/SCR_001647 SciCrunch identifier (RRID:SCR_001647, Cuffdiff)
SCR_015687https://scicrunch.org/resolver/SCR_015687 SciCrunch identifier (RRID:SCR_015687, DESeq2)
SCR_012918https://scicrunch.org/resolver/SCR_012918 SciCrunch identifier (RRID: SCR_012918, DiffBind)
SCR_001575https://scicrunch.org/resolver/SCR_001575 SciCrunch identifier (RRID:SCR_001575, Enrichr)
SCR_014583https://scicrunch.org/resolver/SCR_014583 SciCrunch identifier (RRID:SCR_014583, FastQC)
SCR_006281https://scicrunch.org/resolver/SCR_006281 SciCrunch identifier (RRID:SCR_006281, Galaxy|Europe platform)
SCR_014601https://scicrunch.org/resolver/SCR_014601 SciCrunch identifier (RRID:SCR_014601, ggplot2)
SCR_002798https://scicrunch.org/resolver/SCR_002798 SciCrunch identifier (RRID:SCR_002798, GraphPad Prism)
SCR_005807https://scicrunch.org/resolver/SCR_005807 SciCrunch identifier (RRID:SCR_005807, GREAT: Genomic Regions Enrichment of Annotations Tool)
SCR_003199https://scicrunch.org/resolver/SCR_003199 SciCrunch identifier (RRID:SCR_003199, GSEA software)
SCR_020130https://scicrunch.org/resolver/SCR_020130 SciCrunch identifier (RRID:SCR_020130, HiSeq 2000)
SCR_016386https://scicrunch.org/resolver/SCR_016386 SciCrunch identifier (RRID:SCR_016386, HiSeq 4000)
SCR_011867https://scicrunch.org/resolver/SCR_011867 SciCrunch identifier (RRID:SCR_011867, htseq-count)
SCR_003070https://scicrunch.org/resolver/SCR_003070 SciCrunch identifier (RRID:SCR_003070, ImageJ)
SCR_016418https://scicrunch.org/resolver/SCR_016418 SciCrunch identifier (RRID:SCR_016418, pheatmap)
SCR_002105https://scicrunch.org/resolver/SCR_002105 SciCrunch identifier (RRID:SCR_002105, Samtools)
SCR_004463https://scicrunch.org/resolver/SCR_004463 SciCrunch identifier (RRID: SCR_004463, STAR)
SCR_015805https://scicrunch.org/resolver/SCR_015805 SciCrunch identifier (RRID:SCR_015805, StepOnePlus PCR System)
SCR_013035https://scicrunch.org/resolver/SCR_013035 SciCrunch identifier (RRID:SCR_013035, TopHat)
SCR_023156https://scicrunch.org/resolver/SCR_023156 SciCrunch identifier (RRID:SCR_023156, Trans-Blot Turbo transfer system)
mbexc.de...mming/https://mbexc.de/nfatc1-is-a-central-mediator-of-egfr-induced-arid1a-chromatin-dissociation-during-acinar-cell-reprogramming/ Website entry (mbexc.de)
Linked Antibodies
| PID |
AG |
Type |
Antigen symbol |
Antibody Registry ID |
Name |
| primary-0100 |
 |
primary |
MAPK3/MAPK1 |
AB_330744 |
p44/42 MAPK (Erk1/2) Antibody |
| primary-0640 |
 |
primary |
H3K27ac |
AB_2637079 |
H3K27ac polyclonal antibody |
| primary-1301 |
|
primary |
|
AB_2722554 |
Rabbit negative Ctrl IgG |
| primary-1305 |
|
primary |
|
AB_2722553 |
mouse IgG negative control antibody |
| primary-1554 |
|
primary |
ACTB |
AB_262011 |
Mouse Anti-Actin, β Monoclonal Antibody, Horseradish Peroxidase Conjugated |
| primary-1555 |
|
primary |
AMY |
AB_626668 |
Amylase |
| primary-1556 |
|
primary |
ARID1A |
AB_2637010 |
ARID1A/BAF250A Rabbit |
| primary-1557 |
|
primary |
CDH1 |
AB_397581 |
Mouse Anti-Cadherin, E Monoclonal Antibody, Unconjugated |
| primary-1558 |
|
primary |
CD45 |
AB_2174426 |
Leukocyte Common Antigen |
| primary-1559 |
|
primary |
KRT19 |
AB_2281021 |
Cytokeratin 19 |
| primary-1560 |
|
primary |
EGFR |
AB_10920395 |
EGFR |
| primary-1561 |
|
primary |
p-EGFR (Y1068) |
AB_732110 |
EGFR (phospho Y1068) antibody |
| primary-1562 |
|
primary |
H3K27ac |
AB_2885844 |
Histone H3K27ac (Acetyl Lys27) antibody |
| primary-1563 |
|
primary |
HDAC1 |
AB_2295297 |
Anti-HDAC1 |
| primary-1564 |
|
primary |
H3 |
AB_331563 |
Histone H3 Antibody |
| primary-1565 |
|
primary |
pMAPK (ErK1/2) |
AB_331772 |
Phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) |
| primary-1566 |
|
primary |
MIST1 |
AB_2798639 |
MIST1/bHLHa15 (D7N4B) XP® |
| primary-1567 |
|
primary |
NFAT1 |
AB_448901 |
Anti-NFAT2 antibody |
| primary-1568 |
|
primary |
NFATc1 |
AB_2152503 |
NFATc1 |
| primary-1569 |
|
primary |
NFATc1 |
AB_303308 |
Anti-NFAT2 antibody |
| secondary-1513 |
 |
secondary |
|
AB_330924 |
Anti-mouse IgG, HRP-linked Antibody |