| Property |
Value |
| Working Groups |
RG Jakobs, 
RG Munk |
| Subproject |
RA1.1, RA2.1 |
| Open Access |
Yes |
| Publication Type |
Journal Article |
| Peer Reviewed |
Yes |
| PMID |
35874932 |
| DOI |
10.1038/s43588-021-00050-x |
| Publication Year |
2021 |
| Title |
Colocalization for super-resolution microscopy via optimal transport |
| Journal |
Nature Computational Science |
| ISSN |
2662-8457 |
| URL |
http://dx.doi.org/10.1038/s43588-021-00050-x |
| Pages |
199-211 |
| Issue |
3 |
| Volume |
1 |
| Journal Abbreviation |
Nat Comput Sci |
| Authors |
Tameling C, Stoldt S, Stephan T, Naas J, Jakobs S, Munk A |
| First Author |
Tameling C |
| Last Author |
Munk A |
External Resources
nature.c...-x.pdfhttps://www.nature.com/articles/s43588-021-00050-x.pdf Article fulltext
10.5281/zenodo.4553856https://doi.org/10.5281/zenodo.4553856 DOI (Zenodo, 10.5281/zenodo.4553856)
10.5281/zenodo.4553632https://doi.org/10.5281/zenodo.4553632 DOI (Zenodo, 10.5281/zenodo.4553632)
2/94899https://publications.goettingen-research-online.de/handle/2/94899 GRO.publications identifier
9606https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606 NCBI taxonomy (human, Homo sapiens)
4932https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=4932 NCBI taxonomy (yeast, Saccharomyces cerevisiae)
0000-0002-8028-3121https://orcid.org/0000-0002-8028-3121 ORCID identifier (Stefan Jakobs)
0000-0002-9181-9331https://orcid.org/0000-0002-9181-9331 ORCID identifier (Axel Munk)
03e76ya46https://ror.org/03e76ya46 ROR identifier (03e76ya46, Max Planck Institute for Biophysical Chemistry)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
021ft0n22https://ror.org/021ft0n22 ROR identifier (021ft0n22, University Medical Center Göttingen)
01y9bpm73https://ror.org/01y9bpm73 ROR identifier (01y9bpm73, University of Göttingen)
CVCL_0042https://scicrunch.org/resolver/CVCL_0042 SciCrunch identifier (RRID:CVCL_0042, U2OS)
SCR_010587https://scicrunch.org/resolver/SCR_010587 SciCrunch identifier (RRID:SCR_010587, icy)
SCR_003070https://scicrunch.org/resolver/SCR_003070 SciCrunch identifier (RRID:SCR_003070, ImageJ)
SCR_018863https://scicrunch.org/resolver/SCR_018863 SciCrunch identifier (RRID:SCR_018863, Imspector)
SCR_001622https://scicrunch.org/resolver/SCR_001622 SciCrunch identifier (RRID:SCR_001622, MATLAB)
SCR_001905https://scicrunch.org/resolver/SCR_001905 SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)
SCR_014213https://scicrunch.org/resolver/SCR_014213 SciCrunch identifier (RRID:SCR_014213, STATISTICA)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM1_ESM.pdf Supplemental material
github.com/ctameling/OTChttps://github.com/ctameling/OTC Supplemental material (code)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM2_ESM.pdf Supplemental material (reporting summary)
static-c...SM.ziphttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM6_ESM.zip Supplemental material (source data)
static-c...SM.ziphttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM7_ESM.zip Supplemental material (source data)
static-c...SM.ziphttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM8_ESM.zip Supplemental material (source data)
static-c...SM.ziphttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM9_ESM.zip Supplemental material (source data)
static-c...SM.gifhttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM3_ESM.gif Supplemental material (video)
static-c...SM.gifhttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM4_ESM.gif Supplemental material (video)
static-c...SM.gifhttps://static-content.springer.com/esm/art%3A10.1038%2Fs43588-021-00050-x/MediaObjects/43588_2021_50_MOESM5_ESM.gif Supplemental material (video)
mbexc.de...sport/https://mbexc.de/colocalization-for-super-resolution-microscopy-via-optimal-transport/ Website entry (mbexc.de)
Linked Antibodies
| PID |
AG |
Type |
Antigen symbol |
Antibody Registry ID |
Name |
| primary-0264 |
 |
primary |
GFP |
AB_221568 |
GFP Monoclonal Antibody |
| primary-0541 |
|
primary |
IMMT |
AB_2127193 |
Mitofilin antibody |
| primary-0542 |
|
primary |
TOMM20 |
AB_2207533 |
Tom20 Antibody (FL-145) |
| primary-0543 |
|
primary |
TOMM20 |
AB_399595 |
Purified Mouse Anti-Tom20 antibody |
| primary-0544 |
|
primary |
APOOL |
AB_1078594 |
Anti-APOOL antibody |
| primary-0545 |
|
primary |
ATP5F1B |
AB_304883 |
Anti-ATPB antibody [4.3E8.D10] - Mitochondrial Marker |
| primary-0546 |
|
primary |
GFP |
AB_2313808 |
GFP antibody |
| primary-0547 |
|
primary |
VDAC1 |
AB_478287 |
Anti-VDAC1/Porin antibody [16G9E6BC4] - Mitochondrial Loading Control |
| secondary-0548 |
|
secondary |
|
AB_2534095 |
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 |
| secondary-0549 |
|
secondary |
|
AB_2534091 |
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 |
| secondary-0550 |
|
secondary |
|
AB_2337919 |
AffiniPure Goat Anti-Rabbit IgG (H+L) |
| secondary-0551 |
|
secondary |
|
AB_2340288 |
AffiniPure Sheep Anti-Mouse IgG (H+L) |
| secondary-0552 |
|
secondary |
|
AB_2338504 |
Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) |