| Property |
Value |
| Working Groups |
RG Cramer |
| Subproject |
None |
| Open Access |
No |
| Publication Type |
Journal Article |
| Peer Reviewed |
Yes |
| PMID |
34146481 |
| DOI |
10.1016/j.molcel.2021.05.028 |
| Publication Year |
2021 |
| Title |
Two distinct mechanisms of RNA polymerase II elongation stimulation in vivo |
| Journal |
Molecular Cell |
| ISSN |
1097-2765 |
| eISSN |
1097-4164 |
| URL |
http://dx.doi.org/10.1016/j.molcel.2021.05.028 |
| Pages |
3096-3109.e8 |
| Issue |
15 |
| Volume |
81 |
| Journal Abbreviation |
Mol Cell |
| Authors |
Žumer K, Maier KC, Farnung L, Jaeger MG, Rus P, Winter G, Cramer P |
| First Author |
Žumer K |
| Last Author |
Cramer P |
External Resources
2/100195http://resolver.sub.uni-goettingen.de/purl?2/100195 GRO.publications identifier
ENCFF494WCAhttps://www.encodeproject.org/files/ENCFF494WCA ENCODE identifier (ENCFF494WCA)
ENCFF847JMYhttps://www.encodeproject.org/files/ENCFF847JMY ENCODE identifier (ENCFF847JMY)
GSE159633https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE159633 NCBI GEO Dataset (GSE159633)
GSE60455https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE60455 NCBI GEO Dataset (GSE60455, reused)
GSE108513https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108513 NCBI GEO Dataset (GSE108513, reused)
GSE110028https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110028 NCBI GEO Dataset (GSE110028, reused)
GSM920557https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM920557 NCBI GEO Dataset (GSM920557, reused)
7227https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=7227 NCBI taxonomy (fruit fly, Drosophila melanogaster)
9606https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606 NCBI taxonomy (human, Homo sapiens)
1247190https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1247190 NCBI taxonomy (yeast, Saccharomyces cerevisiae BY4741)
0000-0002-8200-2493https://orcid.org/0000-0002-8200-2493 ORCID identifier (Lucas Farnung)
0000-0001-5454-7755https://orcid.org/0000-0001-5454-7755 ORCID identifier (Patrick Cramer)
1/315https://mbexc.uni-goettingen.de/archive/1/315 Research Data Archive (supplemental material)
03anc3s24https://ror.org/03anc3s24 ROR identifier (03anc3s24, Austrian Academy of Sciences)
03vek6s52https://ror.org/03vek6s52 ROR identifier (03vek6s52, Harvard University)
03e76ya46https://ror.org/03e76ya46 ROR identifier (03e76ya46, Max Planck Institute for Biophysical Chemistry)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
AB_309453https://scicrunch.org/resolver/AB_309453 SciCrunch identifier (RRID:AB_309453)
AB_309394https://scicrunch.org/resolver/AB_309394 SciCrunch identifier (RRID:AB_309394)
AB_390918https://scicrunch.org/resolver/AB_390918 SciCrunch identifier (RRID:AB_390918)
AB_577215https://scicrunch.org/resolver/AB_577215 SciCrunch identifier (RRID:AB_577215)
AB_960973https://scicrunch.org/resolver/AB_960973 SciCrunch identifier (RRID:AB_960973)
AB_2193707https://scicrunch.org/resolver/AB_2193707 SciCrunch identifier (RRID:AB_2193707)
AB_2210059https://scicrunch.org/resolver/AB_2210059 SciCrunch identifier (RRID:AB_2210059)
AB_2827956https://scicrunch.org/resolver/AB_2827956 SciCrunch identifier (RRID:AB_2827956)
CVCL_0004https://scicrunch.org/resolver/CVCL_0004 SciCrunch identifier (RRID:CVCL_0004, K-562)
SCR_006442https://scicrunch.org/resolver/SCR_006442 SciCrunch identifier (RRID:SCR_006442, Bioconductor)
SCR_011841https://scicrunch.org/resolver/SCR_011841 SciCrunch identifier (RRID:SCR_011841, cutadapt)
SCR_015687https://scicrunch.org/resolver/SCR_015687 SciCrunch identifier (RRID:SCR_015687, DESeq2)
SCR_014583https://scicrunch.org/resolver/SCR_014583 SciCrunch identifier (RRID:SCR_014583, FastQC)
SCR_014601https://scicrunch.org/resolver/SCR_014601 SciCrunch identifier (RRID:SCR_014601, ggplot2)
SCR_016381https://scicrunch.org/resolver/SCR_016381 SciCrunch identifier (RRID:SCR_016381, Illumina NextSeq 550 System)
SCR_006525https://scicrunch.org/resolver/SCR_006525 SciCrunch identifier (RRID:SCR_006525, Picard)
SCR_001905https://scicrunch.org/resolver/SCR_001905 SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)
SCR_000432https://scicrunch.org/resolver/SCR_000432 SciCrunch identifier (RRID:SCR_000432, RStudio)
SCR_004463https://scicrunch.org/resolver/SCR_004463 SciCrunch identifier (RRID:SCR_004463, STAR)
SCR_019186https://scicrunch.org/resolver/SCR_019186 SciCrunch identifier (RRID:SCR_019186, tidyverse)
SCR_017048https://scicrunch.org/resolver/SCR_017048 SciCrunch identifier (RRID:SCR_017048, UMI-tools)
cell.com...c1.pdfhttps://www.cell.com/cms/10.1016/j.molcel.2021.05.028/attachment/e67c9157-2b1a-49b8-846b-88c11d1c9b57/mmc1.pdf Supplemental material
broadins...icard/https://broadinstitute.github.io/picard/ Supplemental material (code, reused)
github.com/alexdobin/STARhttps://github.com/alexdobin/STAR Supplemental material (code, reused)
mbexc.de...-vivo/https://mbexc.de/two-distinct-mechanisms-of-rna-polymerase-ii-elongation-stimulation-in-vivo/ Website entry (mbexc.de)
Linked Antibodies
| PID |
AG |
Type |
Antigen symbol |
Antibody Registry ID |
Name |
| primary-1283 |
|
primary |
Rtf1 |
AB_309453 |
Rabbit anti-Rtf1 Antibody |
| primary-1284 |
|
primary |
Paf1 |
AB_309394 |
Rabbit anti-Paf1 Antibody |
| primary-1285 |
|
primary |
HA |
AB_390918 |
Anti-HA mit hoher Affinität |
| primary-1286 |
|
primary |
SUPT6H |
AB_577215 |
Rabbit anti-SUPT6H Antibody |
| primary-1287 |
|
primary |
CTR9 |
AB_960973 |
Rabbit anti-CTR9 Antibody |
| primary-1288 |
|
primary |
|
AB_2193707 |
U1 snRNP 70 Antikörper (C-18) |
| primary-1289 |
|
primary |
|
AB_2210059 |
α Tubulin (3H3087) |
| primary-1290 |
|
primary |
|
AB_2827956 |
Pol II CTD antibody |
| primary-1291 |
|
primary |
|
|
Recombinant Anti-Histone H2B (yeast) antibody [EPR18094] - ChIP Grade |