| Property |
Value |
| Working Groups |
RG Grubmüller |
| Subproject |
None |
| Open Access |
Yes |
| Publication Type |
Journal Article |
| Peer Reviewed |
Yes |
| PMID |
42151144 |
| DOI |
10.1038/s41467-026-72673-5 |
| Publication Year |
2026 |
| Title |
Diverse mechanisms of translation arrest by a Clostridia ribosome stalling peptide CliM |
| Journal |
Nature Communications |
| ISSN |
2041-1723 |
| eISSN |
2041-1723 |
| URL |
https://doi.org/10.1038/s41467-026-72673-5 |
| Issue |
1 |
| Volume |
17 |
| Journal Abbreviation |
Nat Commun |
| Authors |
Yoshida M, Gersteuer F, Berendes O, Fujiwara K, Safdari HA, Paternoga H, Takada H, Obana N, Grubmüller H, Bock LV, Wilson DN, Chiba S |
| First Author |
Yoshida M |
| Last Author |
Chiba S |
External Resources
nature.c...-5.pdfhttps://www.nature.com/articles/s41467-026-72673-5.pdf Article fulltext
EMD-50855https://www.ebi.ac.uk/pdbe/emdb/EMD-50855 EMBL-EBI EMDB identifier (EMD-50855)
EMD-50856https://www.ebi.ac.uk/pdbe/emdb/EMD-50856 EMBL-EBI EMDB identifier (EMD-50856)
EMD-50858https://www.ebi.ac.uk/pdbe/emdb/EMD-50858 EMBL-EBI EMDB identifier (EMD-50858)
EMPIAR-13138https://www.ebi.ac.uk/empiar/EMPIAR-13138 EMBL-EBI EMPIAR identifier (EMPIAR-13138)
2/166500http://resolver.sub.uni-goettingen.de/purl?2/166500 GRO.publications identifier
PRJDB39765https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJDB39765 NCBI bioproject identifier (PRJDB39765)
0009-0000-1346-7193https://orcid.org/0009-0000-1346-7193 ORCID identifier (Felix Gersteuer)
0009-0003-1039-1148https://orcid.org/0009-0003-1039-1148 ORCID identifier (Ole Berendes)
0000-0002-5371-3552https://orcid.org/0000-0002-5371-3552 ORCID identifier (Keigo Fujiwara)
0000-0003-3533-090Xhttps://orcid.org/0000-0003-3533-090X ORCID identifier (Haaris Ahsan Safdari)
0000-0001-8335-3239https://orcid.org/0000-0001-8335-3239 ORCID identifier (Helge Paternoga)
0000-0003-2034-5666https://orcid.org/0000-0003-2034-5666 ORCID identifier (Hiraku Takada)
0000-0002-0637-7904https://orcid.org/0000-0002-0637-7904 ORCID identifier (Nozomu Obana)
0000-0002-3270-3144https://orcid.org/0000-0002-3270-3144 ORCID identifier (Helmut Grubmüller)
0000-0003-4554-7336https://orcid.org/0000-0003-4554-7336 ORCID identifier (Lars V. Bock)
0000-0003-3816-3828https://orcid.org/0000-0003-3816-3828 ORCID identifier (Daniel N. Wilson)
0000-0003-3485-3477https://orcid.org/0000-0003-3485-3477 ORCID identifier (Shinobu Chiba)
9FY1https://www.rcsb.org/structure/9FY1 RCSB PDB Identifier (DOI:10.2210/pdb9FY1/pdb)
9FY2https://www.rcsb.org/structure/9FY2 RCSB PDB Identifier (DOI:10.2210/pdb9FY2/pdb)
9FY3https://www.rcsb.org/structure/9FY3 RCSB PDB Identifier (DOI:10.2210/pdb9FY3/pdb)
5A81https://www.rcsb.org/structure/5A81 RCSB PDB Identifier (DOI:10.2210/pdb5A81/pdb, reused)
5NWYhttps://www.rcsb.org/structure/5NWY RCSB PDB Identifier (DOI:10.2210/pdb5NWY/pdb, reused)
7NSOhttps://www.rcsb.org/structure/7NSO RCSB PDB Identifier (DOI:10.2210/pdb7NSO/pdb, reused)
7O19https://www.rcsb.org/structure/7O19 RCSB PDB Identifier (DOI:10.2210/pdb7O19/pdb, reused)
8CVKhttps://www.rcsb.org/structure/8CVK RCSB PDB Identifier (DOI:10.2210/pdb8CVK/pdb, reused)
8QOAhttps://www.rcsb.org/structure/8QOA RCSB PDB Identifier (DOI:10.2210/pdb8QOA/pdb, reused)
9MTPhttps://www.rcsb.org/structure/9MTP RCSB PDB Identifier (DOI:10.2210/pdb9MTP/pdb, reused)
1/733https://mbexc.uni-goettingen.de/archive/1/733 Research Data Archive (supplemental material)
05t70xh16https://ror.org/05t70xh16 ROR identifier (05t70xh16, Kyoto Sangyo University)
03av75f26https://ror.org/03av75f26 ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
02xg1m795https://ror.org/02xg1m795 ROR identifier (02xg1m795, National Institute of Genetics)
03xgh2v50https://ror.org/03xgh2v50 ROR identifier (03xgh2v50, Toyama Prefectural University)
00g30e956https://ror.org/00g30e956 ROR identifier (00g30e956, Universität Hamburg)
02956yf07https://ror.org/02956yf07 ROR identifier (02956yf07, University of Tsukuba)
AB_2922809https://scicrunch.org/resolver/AB_2922809 SciCrunch identifier (RRID:AB_2922809)
SCR_014222https://scicrunch.org/resolver/SCR_014222 SciCrunch identifier (RRID:SCR_014222, Coot)
SCR_016732https://scicrunch.org/resolver/SCR_016732 SciCrunch identifier (RRID:SCR_016732, CTFFIND)
SCR_002630https://scicrunch.org/resolver/SCR_002630 SciCrunch identifier (RRID:SCR_002630, GitHub)
SCR_014565https://scicrunch.org/resolver/SCR_014565 SciCrunch identifier (RRID:SCR_014565, GROMACS)
SCR_016499https://scicrunch.org/resolver/SCR_016499 SciCrunch identifier (RRID:SCR_016499, MotionCor2)
SCR_014224https://scicrunch.org/resolver/SCR_014224 SciCrunch identifier (RRID:SCR_014224, Phenix)
SCR_008394https://scicrunch.org/resolver/SCR_008394 SciCrunch identifier (RRID:SCR_008394, Python)
SCR_001905https://scicrunch.org/resolver/SCR_001905 SciCrunch identifier (RRID:SCR_001905, R Project for Statistical Computing)
SCR_014225https://scicrunch.org/resolver/SCR_014225 SciCrunch identifier (RRID:SCR_014225, Refmac)
SCR_016274https://scicrunch.org/resolver/SCR_016274 SciCrunch identifier (RRID:SCR_016274, RELION)
SCR_015872https://scicrunch.org/resolver/SCR_015872 SciCrunch identifier (RRID:SCR_015872, UCSF ChimeraX)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM1_ESM.pdf Supplemental material
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM2_ESM.pdf Supplemental material
github.com/keitaroyam/servalcathttps://github.com/keitaroyam/servalcat Supplemental material (code, reused)
goeseek.gwdguser.de/studies/290https://goeseek.gwdguser.de/studies/290 Supplemental material (goeseek study)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM5_ESM.pdf Supplemental material (peer review)
static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM4_ESM.pdf Supplemental material (reporting summary)
static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM6_ESM.xlsx Supplemental material (source data)
static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM7_ESM.xlsx Supplemental material (source data)
static-c...SM.movhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41467-026-72673-5/MediaObjects/41467_2026_72673_MOESM3_ESM.mov Supplemental material (video)
mbexc.de...-clim/https://mbexc.de/diverse-mechanisms-of-translation-arrest-by-a-clostridia-ribosome-stalling-peptide-clim/ Website entry (mbexc.de)
Linked Antibodies
| PID |
AG |
Type |
Antigen symbol |
Antibody Registry ID |
Name |
| primary-1443 |
|
primary |
GFP |
AB_2922809 |
Anti Green Fluorescent Protein, Monoclonal Antibody(mFX75) |