####---- de hypergeometric gene set enrichment files ----####

<*per_ora*>
<*type*>_all_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/all_significant_genes/all_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_all_signficant_genes_enriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/all_significant_genes/enriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_all_signficant_genes_underenriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/all_significant_genes/underenriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_upregulated_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/upregulated_genes/all_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_upregulated_enriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/upregulated_genes/enriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_upregulated_underenriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/upregulated_genes/underenriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_downregulated_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/downregulated_genes/all_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_downregulated_enriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/downregulated_genes/enriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*type*>_downregulated_underenriched_gene_sets = read.table(file="<*path*>data/statistical_analysis/over_representation_analysis/<*type*>/downregulated_genes/underenriched_gene_sets_results.csv"<*/path*>, header=TRUE, sep='\t', quote='',check.names = TRUE)
<*/per_ora*>

